rs221633242 SNP Detail

Summary

• ID
  rs221633242
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126386777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGTCTTAA CAACATTCCA
  TCATGAACAA GGGAGGGGCC AGGAGGCTCC ACCCTTCTCT GAGGAGCTCT TGGCAGTTAA
  TGGATGCTGG GGAATGGAAG CCACTTTCTT CCGGGGTGGA ACCACTGGTA AATTGCTCTG
  CTCCAGTAAA TGCCACTCAC CTATCCTCAA GCCCACAACT CCAATTAAAC TCAGTGGGTC
  Y
  CAAGAAAACA AAACAAACAA ACAAACAAAA AACCACAAAG ACATGAAAAT AGGAGGGGAT
  GGTAGGAGGA GGTAAAAATG AACAGGATAT GTTATAAACA TGCATCAGAT TGTCAAAGAA
  TAATAAATAC AATTTTTAAA AAAATGATGG CACAAGAACC CAAGTGTGAT CTTGGTCTGG
  TTGCTAACAG ACAAAGAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860902	CHEV_8_128183938	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221633242					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126386777 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	1506 bp proximal
Gm30871	predicted gene, 30871	within coordinates
Rr180110	regulatory region 180110	577 bp distal
Rr183380	regulatory region 183380	369 bp proximal