rs221636527 SNP Detail

Summary

• ID
  rs221636527
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61862767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGTTTCCT AAAGCCTGGG
  TGTCCATCCC TACCTAGCAT CCTCCTGGCA TCCTCCTCCT CCTCTCTCCA TCTCTGGACC
  AGTCTTGCCA TTTGCCGTCC CCAGAGTCTC AGATTCACCC CTTTCTCTAG AAGCTTCTGG
  CTCTGCTGGA GTTTCCCAAA GAATTCCTCA AATAGACTCA TTTATTAGTT ACTTCAGTGC
  Y
  TGGTTGCCCC ATAAGCCCAG AATTTCTTCT TCCATTTCTT TTGGGGGTGT CATATGATCC
  CACACCCCGG GGTTTTGTGG AAAGACAGAT CTGTCCGTCT CTCCCAAGGC CCCATTTGAG
  TCCTGCTCTT GCATTAAGTG GAGACTCCAA AGCTCGTCAG AATACATCAT GTTTTGGGGA
  AAAATCTTAG CAGCTTGCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330476	CHEV_10_61489736	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221636527					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61862767 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	1373 bp downstream
Gm66887	predicted gene, 66887	within coordinates