rs221656812 SNP Detail

Summary

• ID
  rs221656812
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:109508205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTCCTTT CTTTTTTTAA
  AGTTTTATTT ATTTAATTTA TATCTTCATG TACACCTGCA TACCAGAAGG GGGCATTAGA
  TTTCATTATG AGATGGTTGT GAGCCATCAT GTGGTTGCTG GGAATTGAAC TCAGGACCAC
  AGGAAAGGGC AGCCAGTGCT CTTAACTGCT GAGCCATCTC TCCAGCACTT CCTTCCTTCC
  W
  TCCTTTCTCC CTCCCTCCCT CTCCCTCTCC CTCTCCCTCT CCCTCTCCCT CTCCCTCTCC
  CCCTCCCTCT CCCCCTCTCC CCCTCTCCCC CTCTCCCCCT CTCCCTCTCT CCCTCTCTCC
  CTCTCTCCCT CTCTCCCTCT CTCCCTCTCT CCCTCCCTCC CTCCCTCCCT CCCTCTCTAT
  CTCCCCTCTC TCCCCTCTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321254428	CHEV_4_109323613	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221656812					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109508205 () rs orientation: forward

Symbol	Name	Function Class
9630013D21Rik	RIKEN cDNA 9630013D21 gene	1419 bp downstream
Gm12811	predicted gene 12811	within coordinates
Gm40227	predicted gene, 40227	813 bp upstream