rs221680877 SNP Detail

Summary

• ID
  rs221680877
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61334824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGAGACTCC ATGGTGGTAT GTAGCAGGCA
  TTTGCTTCCA CAGCACTTCT CACAGTGTCT AACCTAAGTT TGTGAAAATG TGAAAATTTT
  TCTTAGTCTC TGTCACAAGC TGAGATTGAA TCTTGTATCT TCTTTGCAGA AGACATATTC
  Y
  AGCATGACTG AGAAAAGTGT GTCATTCTCC AAATCTCCCA TAGAGATTCT CCGAATCTCC
  CATAGAGCGA CAGCTACAAT ACAAAACGAC CAAAGCAATC AGTGCATTGA GGCTCTGAAA
  TAAACAAGCA CAGGCTTTGA TGATTTCACT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322228031	CHEV_7_68829962	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221680877					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61334824 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	1255 bp downstream
Mir344d-1	microRNA 344d-1	1884 bp upstream
Mir344d-2	microRNA 344d-2	196 bp downstream