rs221708279 SNP Detail

Summary

• ID
  rs221708279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44379618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTAGCTTT GTTTTTAAGC
  TAAGCATGAG ATGGCATGAA ATGCCTCAGC ACAGTACAAC TTGGTGGGTG GATGGGGGGG
  CATGACACAC TTTGCTGCTC AGTTTGGTAC CTGAGCCCTC CCCTGACCCC TGGGAGGTCA
  GTATCGATAC GATGACCTTT GAACTTAGTT AATAAGTCAT TTGACTTGGA AAAAAAAATC
  R
  CATCTCTTTT CTGAGCCCTG TATCCCTCAT TGATAAATGA GCAGGTTACA CTAGTTAGAC
  TCATGGCGGC TCTGTCACTG AGTGCCCCTC CCCATTGCTT GAGGAAATCT AGACATTTAT
  GCCAGCCATT TATGTCCTAT ATAAGCATAT ATTTAAGCTA TCAAAATCGA CTTTGTTCTT
  GGCTGAATGC TGTCTCTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100972	CHEV_4_44392490	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221708279					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44379618 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	937 bp proximal
Gm68903	predicted gene, 68903	within coordinates