rs221732518 SNP Detail

Summary

• ID
  rs221732518
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:76886260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaaaaCCAC ACCAAACAAA CAAGCAAACT
  GGTTCAAAGC CTGatgcttg tataattcca gcactaggaa ggctacctca gtctggcagt
  aagttttcaa agtcaagacc agcctggact acacaagcag atgttccttg aaaacctgaa
  R
  gtcgcatCCC CCTGACTCCT ATCTATAAAC GCCCTTGCTA GTTTCCACAT CAACGGCTCA
  CACCCTCCCT CCTTTTAGAA AAGCCCAAGC AGTCATTAAG CATGCACAGC AAGTGCCGCT
  CACATCACTA AAGCGACAAG TATTTTATTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323754471	CHEV_11_76808936	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221732518					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:76886260 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3300	CpG island 3300	1706 bp proximal
Gm72068	predicted gene, 72068	1636 bp upstream
Rr247222	regulatory region 247222	1740 bp proximal
Rr251643	regulatory region 251643	1899 bp distal
Rr366811	regulatory region 366811	728 bp upstream