rs221771184 SNP Detail

Summary

• ID
  rs221771184
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62375898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggctcacaa ccatctgttc tgacaccctc
  ttctggtgtg tctaaagaca gctacagtgt acttacatat aacaataaat aaatcttaaa
  aaaaaaaaaa aaAAAAAGAT GTCTGcccag gaggcagagg ccggggatct ctgtgagttc
  K
  aggccagcct ggtctacaga gagagttcca gggcagccag ggctacacag aaaaacccta
  tctcagaaaa aaaaaaaaga aagaaagaaa gaaagaaaaa caaacaaaaa aagaTTTTGT
  CAGggggttg gagagatggc tccacggtta                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323703877	CHEV_11_62298574	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221771184					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62375898 () rs orientation: forward

Symbol	Name	Function Class
Gm12278	predicted gene 12278	within coordinates
Gm71776	predicted gene, 71776	1711 bp downstream
Pigl	phosphatidylinositol glycan anchor biosynthesis, class L	within coordinates