rs221817213 SNP Detail

Summary

• ID
  rs221817213
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111258222 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTTAACCA TTAGCTCCAC CTCATTACCA
  GCAATTTCCA TGTTTAAGTT TTTTTTTTTT TCCTTAAAGA CTGAGATAAA TAGCACCTGT
  CCCTGCAGGA CACTTGAGTG ACGATACCCA TGTGCTTCAT TTCATGTCTT CATCTCCAGT
  R
  GTCCGGAGCG CCAAGCCTTG CACATATGAC ATTGCAACAC AAATCCTGCC CTGTTCCTCT
  AAGCAGAAGT CACGCTGACA AAAGCCAAGG AATTACATAA TTATCAGTGT TGCTTGCTAG
  ATAATTGTTC TTTTTAAATG CTTTACTCAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323196679	CHEV_9_111331658	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221817213					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111258222 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	622 bp distal
Rr198795	regulatory region 198795	within coordinates
Rr202628	regulatory region 202628	872 bp distal
Rr202629	regulatory region 202629	759 bp distal