rs221846569 SNP Detail

Summary

• ID
  rs221846569
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128358731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaatttaca gttatgaaat agcagtgaaa
  ataattttat ggctggggtc accacaacat gaggaactat attaaagggt cccagaatca
  tgaagccgag agccacAGGT CTAAAGGCAA GTTCTATCTG GGCATGACAG CCTACAGCTG
  Y
  TTTCTGAGGC CCGATGCTAC AGTGGGAAGA TCAGTTGAGG CTGCCCTGGG CTCAGTGTCC
  AGAGCTGAAC ATGGAGATAC GGTCCTTTCG GCTCACCCCA TGGGCAGCTC AGGGGACCAT
  GCTCTAGCTG AAACGGAGGT GTGGAAAGGC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323534397	CHEV_10_127959918	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221846569					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128358731 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2406	CpG island 2406	1844 bp proximal
Esyt1	extended synaptotagmin-like protein 1	within coordinates
Gm29585	predicted gene 29585	within coordinates
Rr224467	regulatory region 224467	1069 bp proximal
Tssr99886	transcription start site region 99886	382 bp upstream