rs221871027 SNP Detail

Summary

• ID
  rs221871027
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71304474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTGTTGGG GGTGGGCTGT CTCACATGAG ACAGGTCTCA
  AATTGAGTCA GTCATTAGTT GGCTCTACCT TCAATCTCTG CTCCATCTTT ATCACTGTAC
  R
  TTTTGCAGGC AGGACAAATT TGGGGTTAAA GGTGCTGTGG GTGGATTGAT ATCCCTTCCC
  TCCACTGGAA CTCCCTTTTG TAGGATATAA AGAAGGGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323740837	CHEV_11_71227150	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221871027					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71304474 () rs orientation: forward

Symbol	Name	Function Class
Rr235995	regulatory region 235995	1527 bp proximal
Rr251370	regulatory region 251370	528 bp proximal
Rr386247	regulatory region 386247	831 bp upstream