rs221920725 SNP Detail

Summary

• ID
  rs221920725
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99139818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTACTT ATATGCTTAT
  CCTGTTATTA TAAATAACAA TTCCCTACGT ATTAGCCTAC CCTTTTGAGC AGATCTCTGT
  AGAACAATGA AGATATACTG CCTTGTATAT ATGCTATGTA GACAAATAGA CTATTTCTTA
  ATCCTTAATA TGATCCTATA AGAATTCCTA AAATTATAGT AATTATTAAG CACTTTTATA
  R
  TAACACTGCT ATTAAATCCT TCCTAATAGT CAAAACTGCA GTGAGAACTC TACCAGTCTT
  TAGTGTCACC AGTTCATTGC TTCTGAGATG GCTAGCAGGC ATCTACTACT CAGTCACATT
  CCAATAGGTT GTAAGACCAT TAACCAAAGG TCATAAAAAG GGAACTAGTG ATTTACTATA
  GGTGCTAGGA CAGAAGATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135168	CHEV_9_99158184	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221920725					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99139818 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm47199	predicted gene, 47199	1710 bp downstream
Rr383815	regulatory region 383815	15 bp downstream
Rr685374	regulatory region 685374	451 bp distal