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rs221955738 SNP Detail
Summary
  • ID
    rs221955738
  • Variation Type
    SNP
  • Alleles
    A
Genome Location and Flanking Sequence
  • Location
    Chr3:109485123 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CTTCTTAAAT GGGGGCTTCT
    CTGACGAAAC CATGTCCCTG TACCCACAAA GACAAATTCC AACACACATA AAAAGAAAGT
    TCCTCTTAGG AAAATCTCAA TAATTCAATG GTCCCACATA CAACTTCACA TCTACTTGTA
    TAACAAAAAT TAAAAAAGAA ATAAATCCTT CATTAGTTCT GAGATTACTG CAGTAGTTAA
    A
    TAACAAAGAA TTCAATGCAA TTCATCTATA ATCAAAACAC ATTATCAGTT AAATGTTTTC
    TGGAGCCAGA GCTCTGGGCC TTTGGTTTGA GGTTCTATAC CTTTTTTCAG TCATTGGTCT
    GTCATGGCCC AGAAATACTT GAGTTACAGT TTTTACCTAT CTGCTTAAGG CTGTTATTCA
    TATTTCGTTG CTGGGAATAT                                            
    
    A = A
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss320870012 CHEV_3_109380725 CHEVERUD SCREENING_POP f SNP A A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs221955738 SNP A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:109485123 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr583434 regulatory region 583434 395 bp proximal
Vav3 vav 3 oncogene Intron

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory