rs222006934 SNP Detail

Summary

• ID
  rs222006934
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:59024302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGGGAAT AGCTTCTCTG
  TCAGGGTGGG AAGTTCAGGA TTGTGTATCA CTCTTCTATT GATAGTGGTG ATAGTCAAGA
  AAACTTCTTG GCTACATGAC ATTCTTCTGC TGTTTTGAAG AAGCTCAGGT GAGATACTTA
  AATATTCATC CCCATCTAGA ATCAAAGAGC CCACAGAGGA GCTGTGCCAG TATTTGTATT
  R
  ACAGTACCCC ATCATTGATG GACTATACAA AGTTAAAGCT CATTTTAAGA CACATTTAAT
  ACCAAACTCT GATTTCTTCA CAAAGACATG TTGGGAGAAA GGGGGTGCTC TTATAAGGGA
  AAAATCTCAA CAGTACTACA AAAGTAGCTA ACTTTTTTTT TCTAAGATTT ATTTAATTAT
  TATATGTGAG TACACTGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324055326	CHEV_12_60078503	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222006934					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:59024302 () rs orientation: forward

Symbol	Name	Function Class
Rr256937	regulatory region 256937	102 bp distal
Sec23a	SEC23 homolog A, COPII coat complex component	within coordinates
Tssr116440	transcription start site region 116440	1158 bp upstream