rs222012910 SNP Detail

Summary

• ID
  rs222012910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62314885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTAGATT ACATAATACC
  ATAACAATGG CTGACATTTA GGGCACATTC TGCTATGTGC CTTTTGTGCA TTATTGCATT
  TAATCCTTCC CACAATTCCA TGGTGGTATT TTTAGCTCGA TTCTCCAATG GGATCAAATT
  CTCTCCATCT CTAAGGGGGT GTGCTTGCAG ATTTGAAATG GGGAGAGAGG GAGAGAGAGA
  R
  CGCCAGCCAT TTTCATTGTG ATGAGTGAGA ATCAAATTCT ATTGCTACCG TAAGTGCTGT
  TACATAGCTA AATATCAGAC AAATGTGAGT TTGTCAGTGA ACTTTGGGCC ATTTTTGGGG
  GGGAGGCAGG GTTTCTCTGT GGAGCCCCAG CTGTCCTGGA ATTCACTCTG TAGACCAGGC
  TGGCCTCGAA CTCAGAAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325649294	CHEV_18_62341468	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222012910					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62314885 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	1855 bp upstream
Cpgi10125	CpG island 10125	1194 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539066	regulatory region 539066	1609 bp distal
Rr539067	regulatory region 539067	989 bp distal
Rr539068	regulatory region 539068	1893 bp proximal
Tssr151487	transcription start site region 151487	1632 bp downstream
Tssr151488	transcription start site region 151488	1112 bp upstream
Tssr153623	transcription start site region 153623	1828 bp upstream