rs222018881 SNP Detail

Summary

• ID
  rs222018881
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165469008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAAGCCC ATCCTCTACC
  AGGCAAATTG AGCTCCAGAC ACCAATTCCC AGGGCTGGTT AGATATTCTA GAATGCAGCC
  CGTAGGCAGG CAGCCATTTG GTCCCATCTG TCAGCAGAGG CTGCCACCAA GAAAGCAGTT
  CAGACTTGAG TTGGGGGCAC ACTCCCTGGG TGACAGCTGT GGGACTGGCC TCACTTCTCT
  S
  TCCTCGGTCC CCTCTGCTGG ATAGCTTTGT GGAGTGGGGA AATGGTTCAG TGGGTAAAGT
  GCTATTCACA AGAGTGAGCA CCAGAGATCG GATTCTGGGT GCTCGTATAA AACTGAGTGA
  GATGGGGTGT GTTCAGTGTG TGAGCCCAGG GCTGAGGTTG GAGACAGGAG GATTCTGGGT
  GCTCACTGCC AGCCAGCACT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608510	CHEV_2_165452588	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222018881					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165469008 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	within coordinates
Rr569966	regulatory region 569966	860 bp proximal
Rr569967	regulatory region 569967	974 bp proximal