rs222028759 SNP Detail

Summary

• ID
  rs222028759
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:84068083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACAACAA AATATGACAC
  TACAGAAACA ATATAGAATT CTTCACATTT TTTTGGAGAC TAGAAGTCCA TAATCAAAAT
  GTCAACAGTG TTAATTACCT TCTGAAAATT TTCTTCTAGA CTTATCAATT ACTGTCTTCT
  CTGTCTTCAA AGGATCTCTG TCTATCTGTT CCTTAATATC CATTTGTTTA ATTGCACCAG
  C
  TATATTTTAC TAGAATCTAC CCTAAATGAT CATGTTTTAA TTTAATAATA TCTTTAAAGA
  CCCTATCTCT ATCCCTGCTC CCCCACACAT CTTGAGGTAC TGTAGAATAG GACTTCAGCA
  TTGGGTTTTG GGGATATAAT TCAGTCCAGA AAAGACTTCT AGTTCCAGCT TCTAGAATGC
  ACACTTGCCC CCTTTCTCTT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323769350	CHEV_11_83990759	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222028759					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:84068083 () rs orientation: forward

Symbol	Name	Function Class
Acaca	acetyl-Coenzyme A carboxylase alpha	within coordinates
Cpgi3430	CpG island 3430	1917 bp proximal
Rr453130	regulatory region 453130	1611 bp proximal
Tssr103797	transcription start site region 103797	373 bp upstream