rs222028945 SNP Detail

Summary

• ID
  rs222028945
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101029050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGGACTTT TGTTTAAAGA AAAAAACCAA
  AACCTTCACA CATTTTagaa tgatcaatta ttgaaaactg aaccctaaat gggtatctat
  atcacctcct cttgtagaac aaggtagaag aagggcaaaa agaatgtgcg aaggaggaag
  R
  ggtggagtgt tagagagcct tttcctggca caccacggct cctgcactct tgaactctca
  gtgattgtga tatcaggata agactgggcc ggttaacatt ttatcatgga ggggaggaag
  ggattaggag gcttccatcc ctcctgatga                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321229018	CHEV_4_100844458	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222028945					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101029050 () rs orientation: forward

Symbol	Name	Function Class
Jak1	Janus kinase 1	within coordinates
Rr596081	regulatory region 596081	908 bp proximal
Tssr42542	transcription start site region 42542	263 bp downstream