rs222036374 SNP Detail

Summary

• ID
  rs222036374
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:5350969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cgaaggtcc agagttcaaa tcccagcaac
  cacatggtgg ctcacaacca tccgtaacaa gatctgactc cctcttctgg tgtgtctgaa
  gacagctaca gtgtacttac atataataat aaataaatct taaaaaaaaa aaaTTGGCAT
  W
  AAAAAAAAAC CAACAGggat agttggccct gtggtcactg cagcacttgg gagacttggg
  tcccacaccg catctgggga gcacagtagg gcttgccctg gaggaagggc aggggtgaat
  cagccccaag ggtaagagtg caggagagct                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325518191	CHEV_18_5350967	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222036374					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:5350969 () rs orientation: forward

Symbol	Name	Function Class
Gm50064	predicted gene, 50064	within coordinates
Gm52372	predicted gene, 52372	1820 bp downstream
Gm58537	predicted gene, 58537	within coordinates
Rr533383	regulatory region 533383	1858 bp distal