rs222061272 SNP Detail

Summary

• ID
  rs222061272
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44379472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTAGCTG ACCTCAGACA
  CGCCAGAAGA GGGCATCAGA TTTCATTAAG GGCGGTTGTG AGCCACCATG TGGTTGCTGG
  GATTTGAACT CGGGACCTCT GGAAGAGCAG TCAGTGCTCT TAACCGCTGA GTCATCTCTC
  CAGCCCCTCT AGCTTTGTTT TTAAGCTAAG CATGAGATGG CATGAAATGC CTCAGCACAG
  Y
  ACAACTTGGT GGGTGGATGG GGGGGCATGA CACACTTTGC TGCTCAGTTT GGTACCTGAG
  CCCTCCCCTG ACCCCTGGGA GGTCAGTATC GATACGATGA CCTTTGAACT TAGTTAATAA
  GTCATTTGAC TTGGAAAAAA AAATCACATC TCTTTTCTGA GCCCTGTATC CCTCATTGAT
  AAATGAGCAG GTTACACTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100969	CHEV_4_44392344	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222061272					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44379472 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	1083 bp proximal
Gm68903	predicted gene, 68903	within coordinates