rs222092303 SNP Detail

Summary

• ID
  rs222092303
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117584725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTTTTTT TTTTTTCCGA
  GACAGGGTTT CTCTGTGTGG CCCACGCTGT CCTGGAACTC ACTCTGTAGA CCAGACTGGC
  CCGGAACTAA GAAATCCGCC TGCCTCTGCC TTCCAAGTGC TGGGATTAAA GGAGTGCCCC
  ACCATTTTCG GCTTCCCTGT TTTCAAAGCT CACCAGCTCT TACTGTTTGC TAGAAATAGT
  Y
  CCATTGTCAC CCTCCCCTAC ACGTGTGTGG ATTACCCTTC CCTGCTCCCT CAGTAAGAGC
  CTGGGAAGTG TTCTGGCTAG GTGTGATGGA GTACAGTTTC AGTCCCAGTC CCAGGAGTGG
  GAGGGCAGAG GCCTGTGGAT CTCTGCCAGT TCAAAAGAGT TCCATGAGTT CCAGGACGGC
  CAGGGCTGCA TGGTGAGACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499206	CHEV_10_117185876	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222092303					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117584725 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	797 bp downstream
Nup107	nucleoporin 107	1801 bp downstream
Rr439612	regulatory region 439612	1979 bp distal