rs222119032 SNP Detail

Summary

• ID
  rs222119032
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97114238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGTTGACC AGCTCAGGTA
  TCTTTCTGGG CCTTTTGTTT TGGTTGTGAG ACTGGACCCT GTTCATGAAG CCCAGACTGG
  CCTTGAACTT GTGACTGTCC TGAATCAGTC TTCCAAGTGC TGTCACTCCT GGCATCTGCT
  ACCATGCCTG CCTTCTATCA ATTTTTAATA TTGAACATGG AGCTACTAAG GGATGATCCC
  Y
  GGAAATCATC TGTGTTTTTG AAATAATCCT ATTCACTTCA ACTGAGTGTC AGAAACCTGG
  TTTTCCTTGG TTAGTTGGGA TTAATTATTC CAGGCGAGTA TAATTTCATC TCTTTTGCTT
  GTTCGTTTGA GGAAGCCAGC TGACCACTGC TATTTGTCTC AACCTTCAGC TCAGCCGAAC
  CACATTAGTC AATAATAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117083	CHEV_9_97132604	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222119032					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97114238 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	1630 bp downstream
Tssr2982	transcription start site region 2982	1982 bp downstream