rs222160094 SNP Detail

Summary

• ID
  rs222160094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117641383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTGAGGT GCAAAGGGAC
  AGCAAACACT CATTATCGCC TGAAACAATG ATGACTTCAA AAGAGTTATT CTTATTTATA
  GGTGGTGTGC ATGCACATGT GGGGTTCAGG TGCCTGTGGG GGCCAGAAAA GTGTCAGGTT
  CCCTGGAGCT GGAGTTACAG TTGGTTTATG GGTGCTGGGA ACTAAACTTG GGTCTTCTGT
  R
  AGAGCAGAAA GCTATAGACA GTAACAATGT AACAGTAACT TTGAGAAAAC AATGTAACAA
  ATACTGAGAC AATTAGATGT TACTATATAA AATGGTTAAC TCTGTCTATA GTCAAATACC
  TTCTAGAGCA GTAAGCTTTC TCAACCCCGT GGGTGGACAA GGGTTCCCAT ATCAGATATC
  CACTTTACCA TTCATAACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499621	CHEV_10_117242534	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222160094					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117641383 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	within coordinates
Rr221673	regulatory region 221673	833 bp proximal
Rr225990	regulatory region 225990	383 bp distal
Rr385360	regulatory region 385360	within coordinates