rs222183467 SNP Detail

Summary

• ID
  rs222183467
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:98769867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAAGGAC TGATTCTTTG
  TCTAAACCAT CAAAACGGCC AAAATTCCCC TGCCACACCA CCCTCCGTGC CTCAAGATCA
  CACACACACA CAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GGTTTCTAGA
  TGGGAGTGGG AGAAAGAATT CATGACAAAA GGGCAGAGGG CGGGAAAATA ATTTTTGCAT
  G
  TAATACCACA AATAAAGGAA AGGTAAACCA TAAGTATATT GAAGGGATGA TAGCCTTCTT
  TTGAACCCGG GAAAGCCCAA CACTCATTCC CCCTGCCAAC ACCTCTCCCC CTCCCCTCGC
  CCAGCATACC TGGTCATTAG GCCCCGCCTT TCCGGGGCGG AGCTTCCTTA GAAGGCAGAC
  ACATATAAAG AACTCAAATC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LP/J	MA/MyJ	PL/J	PWK/PhJ	SM/J	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
ss378636864	MGP_WTSI_9_98788233	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LP/J	MA/MyJ	PL/J	PWK/PhJ	SM/J	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
rs222183467					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss378636864	MGP_WTSI_9_98788233	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:98769867 () rs orientation: forward

Symbol	Name	Function Class
Gm33700	predicted gene, 33700	397 bp upstream