rs222189868 SNP Detail

Summary

• ID
  rs222189868
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:133833589 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAT CTGTCCCCGT TATCAGATGG
  S
  GCCAGCCTGT GCCTCACTCT CTGTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321345311	CHEV_4_133662193	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222189868					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133833589 () rs orientation: forward

Symbol	Name	Function Class
Rr86088	regulatory region 86088	1989 bp distal
Rr86089	regulatory region 86089	1189 bp distal
Tssr43865	transcription start site region 43865	614 bp downstream
Ubxn11	UBX domain protein 11	within coordinates