rs222229747 SNP Detail

Summary

• ID
  rs222229747
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69488890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG GCGTCACACA TGCTACGTTC
  S
  TTCTCTACCA TTAAGCTGCA CTTCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323730624	CHEV_11_69411566	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222229747					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69488890 () rs orientation: forward

Symbol	Name	Function Class
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	1672 bp downstream
Gm72066	predicted gene, 72066	1665 bp upstream
Rr386229	regulatory region 386229	1343 bp upstream
Rr450033	regulatory region 450033	1484 bp proximal
Rr450034	regulatory region 450034	1525 bp proximal
Rr450035	regulatory region 450035	1977 bp proximal
Tssr102487	transcription start site region 102487	1949 bp upstream
Tssr108712	transcription start site region 108712	1943 bp downstream