rs222260111 SNP Detail

Summary

• ID
  rs222260111
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111935326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTATCCTG GGATGCATGT
  GGCTTGTGGA TACATGCGTG CTTAGCTAAT TTCTAAGTAG ACTGTGAGCC TCCTGAGAGT
  CACTGCAAGC AGGGACTGCT GGTCAATTGC AAGGCTCTGG GTGCCTTAAA GGTGAAAGCG
  AGCCAAATTC TTGTGCCCTT ACACCCCACC CCTCCCAGTC AGGGAGGCAC CGATTGGTGA
  R
  CCAAAGCTAT GCCTCAACCT CAGCTCTCAA AACAGCAATA CTAAGCTGAT GCCAGAAAGC
  TTGCCTTAGC CTGAGAAGTA CAGCTTCCTC CAGACCACCT ACTTACTCAG AGACTGGTAG
  AAAAAGAAGG TGTTTGCATA GCAGGAACTG AAAGAGTAGT AGTGAAGCCC TGGAGGTGGG
  AGTGGGAGTA TACTTGCGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322412413	CHEV_7_119479633	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222260111					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111935326 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	474 bp upstream