rs222261769 SNP Detail

Summary

• ID
  rs222261769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116251199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGCCAAGA AGGCCCTGCT
  TCTGTCCATG CCTGCTCCAT CCAGCATGGA TTGTTACTTC TCTCCATCTC TTTTCATGTT
  TCCTTTACCA TTAATTCCCT TCCTTCTTTG CTTTAGTGAT AGTGGCTCCC CTGCCCCCTA
  GGTCCTTTGT AAGGTTTGTG TCTATCTGCA GAACAAGTTC AAGCATCCCT GAAAACTGTG
  Y
  GGTAAATACG GATAGGCACA AGTGATGGTC CAATATCCTT AAGGGCAACA GCTTTAATCC
  CCAACATCCT TTCTTTTCCA GGCTGGTAGG TACACATGCC TTTTTGAGAC AGCTTCAACT
  GTAAGAGAAA TACATGTAGA CAAACCTCAA ACAGCTTGCC TACTCACTCT CAACTTATCA
  ACTACCTCTG GATTGCTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323488197	CHEV_10_115852350	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222261769					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116251199 () rs orientation: forward

Symbol	Name	Function Class
Gm67349	predicted gene, 67349	732 bp downstream
Rr439316	regulatory region 439316	878 bp proximal