rs222266011 SNP Detail

Summary

• ID
  rs222266011
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135755538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGCATTG AGGTAGGCTT
  CTAATCCCCA TGCTAGGAAG GCATGGGGTG GGCAGGTCCC TGGGGCATGG TGTCCAGCCA
  GCCTAAGCAG CGTGGTGAGC TGCAGGCAAG TGAGAGAGAC CTTGTCTGAA CAAAGGTGGA
  CAGCACCCGA GGGCCACACA CATACACACA CACACACACA CAAGAAATGC ACAGTGTCAC
  R
  GCCTTTTCTC CCAGGGTCAA GGGTGAGTAT TTCCAGGTAA ACCTGTCCAG CACCCTCACC
  TTACCATAGT CAGAGCCAGC TGGCCTGGAG TTTGGCCCTT TCCACCCACA GCAGGACACT
  AGCCTCAGGG CTGGGCCCTT GGGAGCCTGC TGTTGTAGCT CTTGAGAATG GAGCCCAGCC
  TTTTGTGTCT CTCTGGCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697593	CHEV_5_136202554	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222266011					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135755538 () rs orientation: forward

Symbol	Name	Function Class
Por	cytochrome p450 oxidoreductase	within coordinates
Tssr49176	transcription start site region 49176	944 bp downstream
Tssr49177	transcription start site region 49177	910 bp downstream
Tssr49178	transcription start site region 49178	1972 bp upstream