rs222306246 SNP Detail

Summary

• ID
  rs222306246
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98620085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aggcctgcc ctgagaaaat gggtacaatt
  ttactcatca acttcccacc atgacaataa atgctttaag gctagtgaac AGGGTAAGCA
  GAAATGGGAT Aaggggattg ggggtggggt ggggtggagg ggaaataagg aaaggggata
  M
  aaattgaaat gtaaataaag aaaatatcta ataaaataaa aaaatacata gattgtctct
  tcttatcggg atccaccatg ggaaacaatg gagcaggcct tcctctaaag agctatatat
  aatttcccac aggaggctat actggctagt                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867627	CHEV_1_100588937	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222306246					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98620085 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	1116 bp upstream