rs222365225 SNP Detail

Summary

• ID
  rs222365225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97868612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gatgattaa ggatactgaa cattttttca
  ggtgcttctc agccattcgg tattcctcgg gtgagaattc tttgcttagc tctgagcccc
  attttttaat ggggttattt gattttctgg agtccacctt cttgagttct ttatattatt
  R
  tatattagtc ccctatctga tttaggatag gtaaagatcc tttcccaatc tgttggtggc
  ctttttgtct tattgacagt gtcttttgcc ttacagaagc tttgcaattt tatgaggtcc
  catttgtcga ttcttgatct tacagcacaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323124737	CHEV_9_97886978	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222365225					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97868612 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr205512	regulatory region 205512	1767 bp proximal