rs222418425 SNP Detail

Summary

• ID
  rs222418425
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52466249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acaacaatt agtgaaaaaa gaggccatga
  aattttgcaa gacagtaagg aagtgggtct atgctagcat tttgagggag gaaagggaag
  ggagaaatga tataattgta ttatatctca aaaaTATATA TAATTAAAGA AGAACAATAA
  R
  AGAACACCTT TGAAAAAAAT CCCTAAAAGG AAAATGTTTA TCCTTTAACA ACCATTGTGA
  CAAGGAGTTT GCTCCATTTT TGGATGATCA TTAAACTGTG ATTAAAGCAA TAATGCCTTG
  ACCATATATT GATTCTGTGA ACAAAAGTTA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319720162	CHEV_1_52483934	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222418425					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52466249 () rs orientation: forward

Symbol	Name	Function Class
Gm69377	predicted gene, 69377	329 bp upstream
Rr410861	regulatory region 410861	1149 bp proximal
Rr410862	regulatory region 410862	1943 bp proximal