rs222510800 SNP Detail

Summary

• ID
  rs222510800
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5677564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATATATT ATATATTATA
  TATATATTAT ATATTATATA ATTATATAAT TATATATTAT ATATTATATA TTATATGCTT
  ACTATATATA ATATGTAGTT TATACTATTG GGAATTAAAT GCAAGAGTAC AGTTTCTCAG
  CACATAAAAT TTAAAGCACG AGTAAATCTT TTTCTGTTGA TTGTTCTTCA CAGATCATCT
  M
  ACCCTAAAAG AAAAGCTTCT GCTGTTTTAG TGGCTTCCTA GTTGTACACA TTTTTGTCAC
  CTTCCATCTG CTCATGTGCT TTGATGATGA AGAAGCTAGT TGAAAGCACA ATTATCCTTC
  TTGATGTCTA AAGTTCAAGT CACAGCTCCA AAGTGACTGA GTATGATTGT ATTGGTCAGG
  ACATGACGGA TGCAAAAACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324222373	CHEV_13_5626811	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222510800					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5677564 () rs orientation: forward

Symbol	Name	Function Class
Rr284365	regulatory region 284365	438 bp proximal