rs222526922 SNP Detail

Summary

• ID
  rs222526922
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117585250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAACAAATT AGATTTTTCT
  CTCAGCTCCT CCCGCTTTGA CACTTTAGGT AAATACCTTC ACCTGACTGC AGTCCTCCTG
  CTCAGCTTTC TGAGTGCTGG GGTTACAGGC ACCTGACAGT ATTCGATCTG ACATGCAGGC
  ATACCATCCA TCCCTAGTGG CTTGTCTGGG ATAAAATCAG AACCAGAGTT CCTTTATTAC
  S
  TACATGCATA CTCAGTTCCG CTAGTTTTTT GAACACTATG TAACGCTTTC ACCTTGGGGG
  AAAAAAAAAG AAATATAATG GGACGTAAAG ATTAGTATTA AAATTAATCC TCCGTCCGTT
  AGACTGTTCT TGTTTTACCA CATTACTTCA TTTGTGTAGA CTTTAATGTT AAAGCTAAAC
  TATTTCAACA TAAAATGCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499209	CHEV_10_117186401	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222526922					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117585250 () rs orientation: forward

Symbol	Name	Function Class
Gm66856	predicted gene, 66856	1322 bp downstream
Nup107	nucleoporin 107	1276 bp downstream