rs222528232 SNP Detail

Summary

• ID
  rs222528232
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129954984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGAGTGA GGTAACCTAG
  ACACAAAAGA ATAGTAGGCA TTCACTGATA AGTGGATATT AGCCCAAAAG CTCAGAATAC
  CCAAGATACA ATTCACATAC CATATGAAGC TCAAGAAAAA GGAAGAACAA AGTGTGGATG
  GTTCAGTCCT TCTTAGAAGG GGGAATAAAA TACTCAATGT GGGTAGAGGG TAGGACAGAC
  Y
  AGGGAGGAAG AGAGGAGGAG GGGAGAAAAG TGGGGCAGGA TCACGTATTC AAGGAGACAG
  GGATGATATA CAAATGGTCA GGAATTTGAA CAGAGGTGTG TAGCAATGGG GGATATGGAA
  ATGGAGTTAG CCACCAGCAA GTCCCAGATG CTAGGAAAGC AAGAGGCTCC TAGGAACCAA
  CAGGGATGAG ATTAGCTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323544181	CHEV_10_129556171	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222528232					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129954984 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	1124 bp upstream
Rr385500	regulatory region 385500	962 bp downstream