rs222553078 SNP Detail

Summary

• ID
  rs222553078
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101197889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTGATCA GAAGTGGAAA
  TGACAAAGTT TTCGCATGAA AACAAGTGAT TTTGCCCCAC GGCACAGAGC ATGTGCAGTT
  CAGTAAGGGA AATTCTGGTT GTAGACCAAG GAGAACTGGG GTCAGGCATC CCAGTTGGTT
  CATGGATGCT TTGTGGACAT TAATCTGAGT GTTCTCAACT TGGTTATTTG TAAGGAGCCA
  R
  GGGAGGATAT TCCTAGACGG ACAGATACTA CCGTGCCTTG AAGGTTGGGG TCCCCAAAAG
  ATAACAGCAT CCGGAAGATT TTCAGTCTCA CTGAAGAAGA TGATGTCCAG CAATATGTTG
  TCAGGAAATT AAGAAGCAAA ACACCAAGAT TCAGCATCCT GCAACATAAA CATTGCTCTG
  ATTTTTAAAA TGAGGCTGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323832799	CHEV_11_101168377	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222553078					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101197889 () rs orientation: forward

Symbol	Name	Function Class
Gm11617	predicted gene 11617	within coordinates