rs222587534 SNP Detail

Summary

• ID
  rs222587534
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71225027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAATTACC ACAGATTCAA AATACAGAAC
  AATTAAATCT GCTCAATTTC TTCAGCTATG GCCCCCTACA TGTTATCATG TGAAGTCTAT
  TATTTGCTGA ACTCTGACCT TCTGTTTCTA GGtaatctgt ttccttcttg tagttttgct
  Y
  ttcctaaaaa gtccaataaa agaattcata ccatgtttag ccttttAGAA ATTATATTAT
  TAAAAATTCT GAGGCCTATT ACCTTGGgtt atgggctaaa ttgtgttcct ctccacaaat
  ttagatgtta aagcctatac cccatagtgc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325676436	CHEV_18_71251610	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222587534					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71225027 () rs orientation: forward

Symbol	Name	Function Class
Rr393876	regulatory region 393876	1754 bp upstream