rs222589092 SNP Detail

Summary

• ID
  rs222589092
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:72834967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTCTGTTC TGAGGCTGTC ATCCAACCAG
  TTTCCTGGGC CCGCTCTTTT AGCTCTTTTC GTATCCCTGC CAAACTATCC CTGGGAAAGG
  CAGAAGCTAG ACACTCTAAA TCCCAAGGTT TAAGATGATA AAGACCCTCA GAGGCTGGTG
  S
  GAGCCTTTCA GGCCTTTTTG TTCGCTGTGC CTTTGTTTCA GCAATTTCTC CCATCTCAAA
  GGATTTTCAG CGGCATCAAG AGCCTGACAC TTTGCCCGTC CTCGTCCCCG TTCTCACAGA
  CATCTCCAGA GTAAGACAAA GCCATGTTGG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322258977	CHEV_7_80330105	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222589092					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:72834967 () rs orientation: forward

Symbol	Name	Function Class
Gm20083	predicted gene, 20083	within coordinates
Gm28746	predicted gene 28746	within coordinates
Tssr67187	transcription start site region 67187	547 bp upstream
Tssr67188	transcription start site region 67188	579 bp upstream