rs222595373 SNP Detail

Summary

• ID
  rs222595373
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:107440337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAAACAC AACTTAGTTA
  ATATGAATAG AATACATGCT GTGCACCTAG ATTAGGCAGA TCTACCACTA CTCTACCATC
  TTCCACAGCT TATGAGACCC CGTAGACCTT GCAGTTTTTC CAGGCCACGT GCTTCTGCTC
  TGTTTTTCTT CATCTTCCTC TGTGTCCTCT CCCTCTTCCA TTTTCTCCTT CTTCTCTCTT
  M
  CAACCTTCCA TACCACCTTC CCTTTATCTG CCCAATCATC AACTCTCCTT TATTTTACAA
  ATTAAGGTGG GAAGCAGGTT TACAGGAAAA CACATGAGTG CTGACTCATT CTTTGTTTGT
  AGCCCTTCAC AGGAGAATGG AATTAACATC AAATATAATT AGCCCCAGGG CTATCCACAA
  CACTCTAACC TCTGTCTATC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322381908	CHEV_7_114984644	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222595373					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:107440337 () rs orientation: forward

Symbol	Name	Function Class
Gm5002	predicted gene 5002	397 bp upstream
Rr152607	regulatory region 152607	664 bp proximal
Rr381269	regulatory region 381269	within coordinates