rs222605060 SNP Detail

Summary

• ID
  rs222605060
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28218630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACAAAAT AACAACCAAA
  ACTGGGAAAT GCCTTCACGT CTGAAGATGT GCACTCCTGC TTATTTAGTC TCTGGCATGC
  CTATGGTTTT GTGGCTGGTG TTTTGTTTTT GTCAATTTTC TTTTTCACAA TTAATTTTCT
  TTTTTAAAAT TAATGGTGTC TGCCTGAGGT AGTGCATGCG ACGGTAGTCC CTGTTATTTG
  R
  AGAGCAGAGG CCAGAGGGTC TTTTAAGTCT GGGAGTTGAA GAGCATCTCA GATGTTACAC
  TGTGATGTGG CAGACAGGTG GCCCTGAGAG GGGAGGCTGG GAGGTGAGCA GCAGGTGAGT
  AGAGATAAAG CGCCTGCGAA GCTCCCTCGC TGTGCCCGTG GCCGCCAGCC TCCTTGTAGC
  TGCTACACTG TATCTGAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351141	CHEV_17_28136601	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222605060					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28218630 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	1409 bp downstream
Rr340974	regulatory region 340974	1431 bp distal
Rr340975	regulatory region 340975	within coordinates