rs222606302 SNP Detail

Summary

• ID
  rs222606302
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:76586066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGAAGGTG TATTCTATGC CCTCGTGAAG
  TCTGGTTACT CTAAAGGTGG TTTTCTGGAC AGCGGAAGCA CATGTCACCC ACTTGTTATT
  CACAGAGTCT CTCTTCTCTA GTACATAGTT GGTGATTTCA GAACCTCCAT CATCCTTTGG
  W
  GGACCCCACT TCAAGGTCAT GGCTTCTGCT GTGACTTCAT CAAATTTGAT TGGTCCGGTG
  GGGATGCCAG GCTTGCCAAC AACCTTTATA GAAAGAGTTC CTTCCTTGGT GCCAGCAACA
  TTCTTGAGTG TGATTGTGTA TTTTCCAGCA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356308	CHEV_2_76593779	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222606302					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76586066 () rs orientation: forward

Symbol	Name	Function Class
Gm13938	predicted gene 13938	within coordinates
Gm75564	predicted gene, 75564	within coordinates
Tssr24731	transcription start site region 24731	1823 bp upstream
Tssr24732	transcription start site region 24732	1670 bp upstream
Tssr24733	transcription start site region 24733	236 bp downstream
Ttn	titin	within coordinates