rs222695837 SNP Detail

Summary

• ID
  rs222695837
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113618275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGCCTTA AGTGTAGACA
  CTTATGTCGT ATTTAAGCCA TCTTGTGATT TCTGTACACC AGTCATGCAC GACAGACAGC
  CTGCCTCTTC TCTCTTAAAA TATATCCTAG GTATTTTGCC TTGATAATTT TTTTTTAATC
  CCAGCTTTCT ATTGTATAGC TCAAACTGGT GATCCTCCTG CCTCAGCTTC TCCAAAGCTA
  G
  GATTATACAT ACCTGGCATT GAGCTCTTAT CTCTTGAATG TATTTTCACT CTTTATCACT
  ACCAGGGAGC TCGAGGGCTG GGACGGGAAC ATCCGAGATG AAGGGAGGTG ACTCTCCTTT
  GTGCCCTCAG CCTTCCTATC CCCTCCTTGC AGGCTCTGTC CTAGTCTCAG GGTGCCCATG
  AAGATGTCTA TTACCACTGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911272	CHEV_6_113591308	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222695837					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113618275 () rs orientation: forward

Symbol	Name	Function Class
Gm43964	predicted gene, 43964	within coordinates
Irak2	interleukin-1 receptor-associated kinase 2	within coordinates
Rr636559	regulatory region 636559	1781 bp distal
Tssr62463	transcription start site region 62463	1937 bp upstream