rs222803128 SNP Detail

Summary

• ID
  rs222803128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163310266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTATCATAA TCTCCAAAGG
  TAAAAATCCC TTAGGCTGTG GCACTTGTCC TGTGGTCCTA TGAGGTCCCC AAACCCTATT
  GTGTCTCTAT CACCAGCCAG TGGGCAGGAA AGCCTCAGAA CAAGTGAGCA CTGAGTTGCT
  CTCTCAGCTT AACATTCATC AACTAATACA AGTCTGCTTC TCAGTTTTAT TCCTTCCTTC
  Y
  TTCTTTCTTC TTCCAGTCAG GAGCTCACAA TGTGGCCCTG GCAAGGTAAC CTCAACCTCA
  CAGAGATCTG CCTGCCTCTG CCTTCCCGGT GCTGGGATTA GAGGCGTGCA GCACCGTGCC
  TCCCGGCCTC CAGTTATATT TCTAAGAGAG GGAACATTCC TATGAGGTGC AATTTCATAT
  GACAAGCCAA GAATTTGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320603323	CHEV_2_163294082	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222803128					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163310266 () rs orientation: forward

Symbol	Name	Function Class
Fitm2	fat storage-inducing transmembrane protein 2	mRNA-UTR
Rr569385	regulatory region 569385	1174 bp distal