rs222804316 SNP Detail

Summary

• ID
  rs222804316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70876483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAACACTG AGAAATGGGT
  TGAGACAGGA ACTCACTATA AAAAGCTGAG GAAGAAGACA AAATGTTGAA GTTGCCCCTC
  CAGCTCAGAG ACCAGAAGTA CAGAAAGCAC CTTAGCAGGA ATGTTGTTTT TCCAAGTATG
  CAAAGCCCTA TATCATAGCC CCCATCCAAC TTGCAGGTAC CTGTTCCAGG AGCCACTGGG
  R
  CAGGAAAGAA TTAGCCCATA CCTGCCTATC AAGGTTCGTA AACCTTTCAC AGTGAAAATG
  GGGTCTCCAA AGTAGGAGGA AGGCTGGTGT CTTGGATGGC AGATATGTGA ACATTTTCCT
  GATTTCTTGG TCTTTTTCTT TTAAGAAATG CACCCAGCAT TTGCTAGCTT GGATCTGGCT
  GTCTTTAGAA CTTGATTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416327	CHEV_13_70867242	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222804316					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70876483 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Gm36607	predicted gene, 36607	within coordinates
Rr482287	regulatory region 482287	711 bp proximal