rs222831085 SNP Detail

Summary

• ID
  rs222831085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:4222979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGTTCCTC ATAATTGGTA CTCATCCTAT
  TTTTGATACC ATCATCTAGG TGCTTGCCCA TTAGGCTGTG TTTCAACTGT TTAACCTGAG
  ACCAAGGAGT ATAGGAAATC ATGTGTCCTG TAAGCAAGGt tttttttttt tttttttttt
  Y
  CCTTCAGTGG AGCAAATTGC CCTCTTTCAT TTATGCAGAA TGGAAACTCT ACATGGTAGA
  GTTTCCTCTG AAAGAGTTCT TCCTGAGAGT TCTCTAATCC TCAGAACCCA TGCCCAGCCG
  GACCTCACAG AGCAGGGAAT AGTCATTTGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320206198	CHEV_2_4139214	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222831085					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:4222979 () rs orientation: forward

Symbol	Name	Function Class
Frmd4a	FERM domain containing 4A	within coordinates
Gm38348	predicted gene, 38348	within coordinates
Tssr15936	transcription start site region 15936	within coordinates