rs222861117 SNP Detail

Summary

• ID
  rs222861117
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95722354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTCTGGG CCAGGAAAGA
  GGGGGAGAAA AGGGAGGTTT GGTAGCTGAC CTTGGGAACA GAAAGATCCT GCAGTCCACA
  GACGGGCATT CTGCCTGGGC CTTGGGGAAC CCAGTGCATC CCCCAGAAAG CCAGCGGGGT
  GGCCTTGGGC AACTCAAGAA AGCAGATAGA AAAAGGGGAA CTTAGAGGGG ACACAGAGAC
  K
  GCTGTAGTCT GAAAGGGAAG AAAGTCTGGA CAGATCTGTG CGTCTTCTTT GTCCCTCACT
  GCCTGCTCAA AGGTAGGTTT TTCCCTAATG TACATACCCT AAATTGGCCA AGGATGGGGG
  CCATAGTCTC CCATTGCAGA GGACGGGGTC ATAGTTACCC ATTGACCAAG CAGGAAACTG
  AGACCCACTG AGATGCAGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809833	CHEV_8_97519626	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222861117					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95722354 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adgrg1	adhesion G protein-coupled receptor G1			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Tssr78944	transcription start site region 78944			1399 bp downstream
Tssr78945	transcription start site region 78945			1336 bp downstream
Tssr78946	transcription start site region 78946			1293 bp downstream
Tssr78947	transcription start site region 78947			1005 bp downstream
Tssr78948	transcription start site region 78948			937 bp downstream
Tssr78949	transcription start site region 78949			923 bp downstream
Tssr78950	transcription start site region 78950			874 bp downstream
Tssr78951	transcription start site region 78951			105 bp downstream
Tssr78952	transcription start site region 78952			32 bp downstream
Tssr78953	transcription start site region 78953			within coordinates
Tssr78954	transcription start site region 78954			24 bp upstream