rs222889984 SNP Detail

Summary

• ID
  rs222889984
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:3379865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGGATAAGG AGATCTGTGG GCCTCCTCTA
  GACTACAGGG ACCATAGTCT AATGCTAATA TTCTTTCAAA AAATACCACC TTAGCATGAA
  CAATGGACAC TATCACCAGA AGTTctcttt tccattgtga catgtatagc tcaactctgt
  W
  tagctcaact atctttctca ctattagaaa aacacacatc attatattga tttcacccat
  atatttccga atgttcacgt cctctcaaac ttgtaactta actacacctg acaattcatt
  ttgacatgtC AATTTCAATT TAAAACTTGT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325087684	CHEV_16_3562001	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222889984					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:3379865 () rs orientation: forward

Symbol	Name	Function Class
Gm61615	predicted gene, 61615	within coordinates
Tssr136819	transcription start site region 136819	1825 bp upstream