rs222931149 SNP Detail

Summary

• ID
  rs222931149
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28722765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCAATAA GTAAATATAA
  AAGGGCATTT TAATAACGTT TTTGAGGATT TGAGTTCATC AACTGTTTTC ACACCAATCA
  ATTTCTATCA GGTTTTCAAA ACAGGAAAAG GAAACAAGGA GCCAGAGGTG TAAGCACCCA
  GGAAAAGTGC ATATGTTTAA CCGATGCAAG ACCCTTAGCG CAAACCCCAG CACCAAAACA
  W
  AAACGAAAAT AAAGTGACCA GTTTCTTAAA AGCATTTTTT CTTGTATCTC AGAGCTCACA
  TACATACCAG AAATGATGAC ATAAATATCA TGTACACATT CACTGGCTTG CTCTCACCCT
  GCCATTTTAT ATTTCCTCCA CATATCAAAA TAAATAAATA AATAGGCATC TATAGGTATA
  ATTATTCTGT TCCCCTCTCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325126493	CHEV_16_28904099	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222931149					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28722765 () rs orientation: forward

Symbol	Name	Function Class
Mb21d2	Mab-21 domain containing 2	within coordinates
Rr513964	regulatory region 513964	1247 bp proximal
Tssr140667	transcription start site region 140667	1398 bp upstream