rs223028772 SNP Detail

Summary

• ID
  rs223028772
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:54998786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGCTCTC TGGTTAGACT
  GGCTAATGGT TTATCTATCT TGTTGAGCTT TCTTTTGTGC TGTCAAGCTA CCAGTTTATG
  ATCTTTCTAG TTTCTTTTTG TTGTCACTTA GAGCTATGAG TTTTCCTCTT ATCACTGCTT
  TCATTGTGTC CCATAATTTT TGGTATGATA TGCTTTCATT TTTGCTAAGT ACTAAAAAGT
  Y
  TTCAATTTCT TTCTTTATTT CTTCCTTGAC CTAGCTTTCA ATCATTGAGT AGAGACTTGT
  TCAGTTTCCA TGTGAATGTA GACTTTACAT TGTTTATGTT GTTATTGAAG TCCAGCTTTA
  GTTCAGATGA TCTCATAGGA TCCATGGAAT TATTTCAATC ATCTTGTATT TGTTGAGGCC
  TGTTTTTTTG GAGAATGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323309623	CHEV_10_54842496	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223028772					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:54998786 () rs orientation: forward

Symbol	Name	Function Class
Gm46190	predicted gene, 46190	1672 bp upstream