rs223052347 SNP Detail

Summary

• ID
  rs223052347
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:123046775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcggtaatg cacgccttta atcccaggtg
  gaggtaggcg gatctatctt agtgtgtaca agtcaactgg tctacagagc aagttccagg
  acagtggagg ctacacagag aaaccctgtc tggagaaacc aaaaGAGAAA GAGGCAGGGT
  R
  GGATGGGGGG GCAGGCCATA CTTGGGGAGG Aggagggacg gctcagtggt taagagcact
  taattacttt tctagagaac ccaagtttgg tcttcagctc ttgtgtcagg aagctccagc
  cacaaggaat ctgcccccat cttctgttct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322850580	CHEV_8_124843936	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223052347					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123046775 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr366733	regulatory region 366733			300 bp downstream
Rr366734	regulatory region 366734			1753 bp upstream
Zfpm1	zinc finger protein, multitype 1			Intron
				Noncoding-Transcript-Variant