rs223066230 SNP Detail

Summary

• ID
  rs223066230
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110974458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTTTCAC CTAAGGGCAT
  AGTTACTTTT TAAAACAAAT ATGAACTTCG GTTTTTTGTT TTTATTTGCT TTTTGATACA
  GGGTCTCTCT ATATAACTCT GGCTGTTCTG GAACTTACTC TGTAGGCCAG GCTGGCCTCA
  AACTAACAGA TCCACCTGCC TCTACCTCTG CCTCCCTACT GCTGCGATTA AAGGCATCTG
  R
  TACCACCTAG CTTGTGTTTT ATTTAATTTT TTTTGAAGTA TAATTTTCTC TCTCCCTTCC
  TTCCTTCCTT TTAAATCTAT TTTTGAGACT TGATCTCCTT TTGTGTTGTG CTGACTGGCT
  GGGAGCTCAC TGTGTAGACA TGGTTAACCA CACCCGGTAA AGTGAACTTT TAATATTCAG
  TCAGCACACA TTAATTAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195909	CHEV_9_111047894	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223066230					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110974458 () rs orientation: forward

Symbol	Name	Function Class
Lrrfip2	leucine rich repeat (in FLII) interacting protein 2	within coordinates
Rr687307	regulatory region 687307	351 bp distal
Tssr87483	transcription start site region 87483	1305 bp upstream